Publications/Image Processing and Analysis

Publications

Biological	Brain	Image Processing	Image-Guided	OCT
Motion Estimation	Mapping	and Analysis	Interventions

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A. Carass, A. Lang, M. Hauser, P.A. Calabresi, H.S. Ying, and J.L. Prince, "Multiple-object geometric deformable model for segmentation of macular OCT", Biomedical Optics Express, 5(4):1062-1074, 2014. (doi)
A. Jog, A. Carass, and J.L. Prince, "Improving Magnetic Resonance Resolution with Supervised Learning", 11th IEEE International Symposium on Biomedical Imaging (ISBI 2014), Beijing, China, April 28 - May 2, 2014.
A. Lang, A. Carass, P.A. Calabresi, H.S. Ying, and J.L. Prince, "An adaptive grid for graph-based segmentation in macular cube OCT", Proceedings of SPIE Medical Imaging (SPIE-MI 2014), San Diego, CA, February 15-20, 2014.
G.A. Sigurdsson and J.L. Prince, "Smoothing fields of weighted collections with applications to diffusion MRI processing", Proceedings of SPIE Medical Imaging (SPIE-MI 2014), San Diego, CA, February 15-20, 2014.
E.K. Swingle, A. Carass, A. Lang, P.A. Calabresi, H.S. Ying, and J.L. Prince, "Microcystic macular edema detection in retina OCT images", Proceedings of SPIE Medical Imaging (SPIE-MI 2014), San Diego, CA, February 15-20, 2014.

A. Lang, A. Carass, M. Hauser, E.S. Sotirchos, P.A. Calabresi, H.S. Ying, and J.L. Prince, "Retinal layer segmentation of macular OCT images using boundary classification", Biomedical Optics Express, 4(7):1133-1152, 2013. (doi)
M. Chen, A. Lang, E. Sotirchos, H.S. Ying, P.A. Calabresi, J.L. Prince, and A. Carass, "Deformable Registration of Macular OCT Using A-mode Scan Similarity", Tenth IEEE International Symposium on Biomedical Imaging (ISBI 2013), San Francisco, CA, April 7 - 11, 2013. (doi)
Z. Yang, J.A. Bogovic, A. Carass, M. Ye, P.C. Searson, and J.L. Prince, "Automatic Cell Segmentation in Fluorescence Images of Confluent Cell Monolayers Using Multi-object Geometric Deformable Model (MGDM)", Proceedings of SPIE Medical Imaging (SPIE-MI 2013), Orlando, FL, February 9-14, 2013. (doi)
A. Lang, A. Carass, E. Sotirchos, and J.L. Prince, "Segmentation of Retinal OCT Images using a Random Forest Classifier", Proceedings of SPIE Medical Imaging (SPIE-MI 2013), Orlando, FL, February 9-14, 2013. (doi)
J.A. Bogovic, J.L. Prince, and P.-L. Bazin, "A Multiple Object Geometric Deformable Model for Image Segmentation", Computer Vision and Image Understanding, 117(2):145-157, 2013. (doi) (PubMed)

B.A. Landman, A.L. Asman, A.G. Scoggins, J.A. Bogovic, F. Xing, and J.L. Prince, "Robust Statistical Fusion of Image Labels", IEEE Trans. on Medical Imaging, 31(2):512-522, February 2012. (doi) (PubMed) (PMCID 3262958)
F. Xing, A.J. Asman, J.L. Prince, and B.A. Landman, "Finding Seeds for Segmentation Using Statistical Fusion", Proceedings of SPIE Medical Imaging (SPIE-MI 2012), San Diego, CA, February 4-9, 2012. (doi)
J. Woo, Y. Bai, S. Roy, E. Murano, M. Stone, and J.L. Prince, "Super-resolution reconstruction for tongue MR images", Proceedings of SPIE Medical Imaging (SPIE-MI 2012), San Diego, CA, February 4-9, 2012. (doi)
B.A. Landman, A.J. Asman, A.G. Scoggins, J.A. Bogovic, J.A. Stein, and J.L. Prince, "Foibles, follies, and fusion: Web-based collaboration for medical image labelling", NeuroImage, 59(1):530–539, January 2012. (doi) (PubMed)

A.J. Asman, A.G. Scoggins, J.L. Prince, and B.A. Landman, "Foibles, Follies, and Fusion: Assessment of Statistical Label Fusion Techniques for Web-Based Collaborations using Minimal Training", Proceedings of SPIE Medical Imaging (SPIE-MI 2011), Orlando, FL, February 12-17, 2011. (doi) (PubMed) (PMCID 3083117)

J.A. Bogovic, P.-L. Bazin, J.L. Prince, "Topology-Preserving STAPLE", IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA 2010), San Francisco, California, June 14, 2010. (doi)
B.A. Landman, J.A. Bogovic, J.L. Prince, "Simultaneous Truth and Performance Level Estimation with Incomplete, Over-complete, and Ancillary Data", Proceedings of SPIE Medical Imaging (SPIE-MI 2010), San Diego, CA, February 16-21, 2010. (doi) (PubMed) (PMCID 2917119)
L.M. Ellingsen, G. Chintalapani, R.H. Taylor, and J.L. Prince, "Robust deformable image registration using prior shape information for atlas to patient registration", Comput. Med. Imaging Graph, 34(1):79-90, January 2010. (PubMed)